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/rsrch6/home/biostatistics/cgu3/LSC_GNN/python311/lib/python3.11/site-packages/deeprobust/graph/defense/__init__.py:15: UserWarning: Please install pytorch geometric if you would like to use the datasets from pytorch geometric. See details in https://pytorch-geometric.readthedocs.io/en/latest/notes/installation.html
warnings.warn("Please install pytorch geometric if you " +
Traceback (most recent call last):
File "/rsrch6/home/biostatistics/cgu3/LSC_GNN/python311/lib/python3.11/site-packages/deeprobust/graph/defense_pyg/__init__.py", line 2, in <module>
from .gcn import GCN
File "/rsrch6/home/biostatistics/cgu3/LSC_GNN/python311/lib/python3.11/site-packages/deeprobust/graph/defense_pyg/gcn.py", line 9, in <module>
from torch_sparse import coalesce, SparseTensor, matmul
File "/rsrch6/home/biostatistics/cgu3/LSC_GNN/python311/lib/python3.11/site-packages/torch_sparse/__init__.py", line 39, in <module>
from .storage import SparseStorage # noqa
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/rsrch6/home/biostatistics/cgu3/LSC_GNN/python311/lib/python3.11/site-packages/torch_sparse/storage.py", line 5, in <module>
from torch_scatter import scatter_add, segment_csr
ModuleNotFoundError: No module named 'torch_scatter'
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/rsrch6/home/biostatistics/cgu3/LSC_GNN/lsc_gnn/main.py", line 17, in <module>
from src.data.utils import GraphData
File "/rsrch6/home/biostatistics/cgu3/LSC_GNN/lsc_gnn/src/data/utils.py", line 4, in <module>
from src.data.data_transform import get_data
File "/rsrch6/home/biostatistics/cgu3/LSC_GNN/lsc_gnn/src/data/data_transform.py", line 19, in <module>
from deeprobust.graph.global_attack import MetaApprox, Metattack
File "/rsrch6/home/biostatistics/cgu3/LSC_GNN/python311/lib/python3.11/site-packages/deeprobust/graph/global_attack/__init__.py", line 10, in <module>
from .prbcd import PRBCD
File "/rsrch6/home/biostatistics/cgu3/LSC_GNN/python311/lib/python3.11/site-packages/deeprobust/graph/global_attack/prbcd.py", line 7, in <module>
from deeprobust.graph.defense_pyg import GCN
File "/rsrch6/home/biostatistics/cgu3/LSC_GNN/python311/lib/python3.11/site-packages/deeprobust/graph/defense_pyg/__init__.py", line 10, in <module>
warnings.warn("Please install pytorch geometric if you " +
^^^^^^^^
NameError: name 'warnings' is not defined. Did you mean: 'Warning'?
The error is caused by no import warnings in global_attack/init.py and graph/defense/init.py
from .base_attack import BaseAttack
from .dice import DICE
from .mettack import MetaApprox, Metattack
from .random_attack import Random
from .topology_attack import MinMax, PGDAttack
from .node_embedding_attack import NodeEmbeddingAttack, OtherNodeEmbeddingAttack
from .nipa import NIPA
try:
from .prbcd import PRBCD
except ImportError as e:
print(e)
warnings.warn("Please install pytorch geometric if you " +
"would like to use the datasets from pytorch " +
"geometric. See details in https://pytorch-geom" +
"etric.readthedocs.io/en/latest/notes/installation.html")
__all__ = ['BaseAttack', 'DICE', 'MetaApprox', 'Metattack', 'Random', 'MinMax', 'PGDAttack', 'NIPA', 'NodeEmbeddingAttack', 'OtherNodeEmbeddingAttack', 'PRBCD']
When not all torch_sparse, torch_scatter modules are needed, this should only output a warning.
The text was updated successfully, but these errors were encountered:
The error is caused by no import warnings in global_attack/init.py and graph/defense/init.py
When not all torch_sparse, torch_scatter modules are needed, this should only output a warning.
The text was updated successfully, but these errors were encountered: