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NEWS.md

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seqMeta 1.6.7

  • CRAN win-oldrel build error fixed (#30)

seqMeta 1.6.6

  • c.seqMeta was not exported (#26)
  • version 1.42 of CompQuadForm changed the name of the results (#28)

seqMeta 1.6.5

  • Updated to comply with CRAN policy to explicitly import all functions in packages other than base (ex. stats, utils). (#10)
  • check_format_skat relied on calling environment to define formula. (#17)
  • burdenMeta and singlesnpMeta produced warnings if the standard error was 0. Now returns \code{NA}. (#12, #13)
  • prepScores and prepScores2 scaled theta incorrectly when using a kinship matrix. (#15, #16)
  • prep family of functions incorrectly stated that the returned maf of a seqMeta object was the "minor allele frequency" when in reality it is the "alternate allele frequency". (#14)
  • make sure coxme version is at least 2.2-4. The definition of variance component estimates in lmekin changed. (#20)
  • prepCox function calculates the projection matrix incorrectly for collinear variants in the same gene. (#21)
  • internal function impute_to_mean could generate an error. (#23)
  • added examples to prepScores2 documentation. (#7)
  • added verbose functionality to prepScores2. (#11)