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Stopped @ stage 8 BLAST4 #44

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anu24s opened this issue Nov 16, 2020 · 1 comment
Open

Stopped @ stage 8 BLAST4 #44

anu24s opened this issue Nov 16, 2020 · 1 comment

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@anu24s
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anu24s commented Nov 16, 2020

My Orthomcl-pipeline stopped at stage 8 due to power failure, since I am working from home. It was working fine till then without any errors.
Do you have any suggestions on how to continue or Resume my run from this stage , rather than starting all over again, since I am working on a total of 15 proteomes and the size of the results of each of the 4 blast run file is 18gb each and it already took a lot of time

@apetkau
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apetkau commented Nov 17, 2020

Hello @anu24s. Unfortunately there is no mechanism in the orthomcl-pipeline to restart in the middle. You could take a look at the original OrthoMCL instructions (https://orthomcl.org/common/downloads/software/v2.0/UserGuide.txt) and carry on the analysis from there if you wish.

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