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initial import, fixes #2 
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‎HEADER.txt

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/*
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feature-multimodule Enumerated sequence feature service.
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Copyright (c) 2014-2015 National Marrow Donor Program (NMDP)
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This library is free software; you can redistribute it and/or modify it
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under the terms of the GNU Lesser General Public License as published
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by the Free Software Foundation; either version 3 of the License, or (at
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your option) any later version.
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This library is distributed in the hope that it will be useful, but WITHOUT
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ANY WARRANTY; with out even the implied warranty of MERCHANTABILITY or
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FITNESS FOR A PARTICULAR PURPOSE. See the GNU Lesser General Public
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License for more details.
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You should have received a copy of the GNU Lesser General Public License
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along with this library; if not, write to the Free Software Foundation,
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Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA.
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> http://www.gnu.org/licenses/lgpl.html
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*/

‎client/COPYING

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‎client/COPYING.LESSER

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GNU LESSER GENERAL PUBLIC LICENSE
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Version 3, 29 June 2007
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Copyright (C) 2007 Free Software Foundation, Inc. <http://fsf.org/>
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Everyone is permitted to copy and distribute verbatim copies
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of this license document, but changing it is not allowed.
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This version of the GNU Lesser General Public License incorporates
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the terms and conditions of version 3 of the GNU General Public
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License, supplemented by the additional permissions listed below.
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0. Additional Definitions.
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As used herein, "this License" refers to version 3 of the GNU Lesser
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General Public License, and the "GNU GPL" refers to version 3 of the GNU
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General Public License.
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"The Library" refers to a covered work governed by this License,
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other than an Application or a Combined Work as defined below.
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An "Application" is any work that makes use of an interface provided
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by the Library, but which is not otherwise based on the Library.
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Defining a subclass of a class defined by the Library is deemed a mode
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of using an interface provided by the Library.
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A "Combined Work" is a work produced by combining or linking an
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Application with the Library. The particular version of the Library
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with which the Combined Work was made is also called the "Linked
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Version".
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The "Minimal Corresponding Source" for a Combined Work means the
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Corresponding Source for the Combined Work, excluding any source code
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for portions of the Combined Work that, considered in isolation, are
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based on the Application, and not on the Linked Version.
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The "Corresponding Application Code" for a Combined Work means the
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object code and/or source code for the Application, including any data
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and utility programs needed for reproducing the Combined Work from the
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Application, but excluding the System Libraries of the Combined Work.
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1. Exception to Section 3 of the GNU GPL.
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You may convey a covered work under sections 3 and 4 of this License
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without being bound by section 3 of the GNU GPL.
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2. Conveying Modified Versions.
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If you modify a copy of the Library, and, in your modifications, a
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facility refers to a function or data to be supplied by an Application
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that uses the facility (other than as an argument passed when the
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facility is invoked), then you may convey a copy of the modified
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version:
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a) under this License, provided that you make a good faith effort to
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ensure that, in the event an Application does not supply the
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function or data, the facility still operates, and performs
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whatever part of its purpose remains meaningful, or
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b) under the GNU GPL, with none of the additional permissions of
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this License applicable to that copy.
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3. Object Code Incorporating Material from Library Header Files.
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The object code form of an Application may incorporate material from
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a header file that is part of the Library. You may convey such object
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code under terms of your choice, provided that, if the incorporated
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material is not limited to numerical parameters, data structure
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layouts and accessors, or small macros, inline functions and templates
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(ten or fewer lines in length), you do both of the following:
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a) Give prominent notice with each copy of the object code that the
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Library is used in it and that the Library and its use are
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covered by this License.
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b) Accompany the object code with a copy of the GNU GPL and this license
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document.
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4. Combined Works.
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You may convey a Combined Work under terms of your choice that,
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taken together, effectively do not restrict modification of the
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portions of the Library contained in the Combined Work and reverse
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engineering for debugging such modifications, if you also do each of
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the following:
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a) Give prominent notice with each copy of the Combined Work that
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the Library is used in it and that the Library and its use are
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covered by this License.
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b) Accompany the Combined Work with a copy of the GNU GPL and this license
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document.
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c) For a Combined Work that displays copyright notices during
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execution, include the copyright notice for the Library among
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these notices, as well as a reference directing the user to the
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copies of the GNU GPL and this license document.
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d) Do one of the following:
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0) Convey the Minimal Corresponding Source under the terms of this
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License, and the Corresponding Application Code in a form
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suitable for, and under terms that permit, the user to
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recombine or relink the Application with a modified version of
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the Linked Version to produce a modified Combined Work, in the
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manner specified by section 6 of the GNU GPL for conveying
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Corresponding Source.
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1) Use a suitable shared library mechanism for linking with the
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Library. A suitable mechanism is one that (a) uses at run time
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a copy of the Library already present on the user's computer
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system, and (b) will operate properly with a modified version
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of the Library that is interface-compatible with the Linked
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Version.
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e) Provide Installation Information, but only if you would otherwise
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be required to provide such information under section 6 of the
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GNU GPL, and only to the extent that such information is
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necessary to install and execute a modified version of the
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Combined Work produced by recombining or relinking the
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Application with a modified version of the Linked Version. (If
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you use option 4d0, the Installation Information must accompany
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the Minimal Corresponding Source and Corresponding Application
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Code. If you use option 4d1, you must provide the Installation
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Information in the manner specified by section 6 of the GNU GPL
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for conveying Corresponding Source.)
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5. Combined Libraries.
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You may place library facilities that are a work based on the
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Library side by side in a single library together with other library
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facilities that are not Applications and are not covered by this
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License, and convey such a combined library under terms of your
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choice, if you do both of the following:
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a) Accompany the combined library with a copy of the same work based
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on the Library, uncombined with any other library facilities,
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conveyed under the terms of this License.
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b) Give prominent notice with the combined library that part of it
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is a work based on the Library, and explaining where to find the
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accompanying uncombined form of the same work.
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6. Revised Versions of the GNU Lesser General Public License.
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The Free Software Foundation may publish revised and/or new versions
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of the GNU Lesser General Public License from time to time. Such new
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versions will be similar in spirit to the present version, but may
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differ in detail to address new problems or concerns.
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Each version is given a distinguishing version number. If the
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Library as you received it specifies that a certain numbered version
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of the GNU Lesser General Public License "or any later version"
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applies to it, you have the option of following the terms and
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conditions either of that published version or of any later version
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published by the Free Software Foundation. If the Library as you
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received it does not specify a version number of the GNU Lesser
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General Public License, you may choose any version of the GNU Lesser
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General Public License ever published by the Free Software Foundation.
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If the Library as you received it specifies that a proxy can decide
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whether future versions of the GNU Lesser General Public License shall
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apply, that proxy's public statement of acceptance of any version is
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permanent authorization for you to choose that version for the
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Library.

‎client/HEADER.txt

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/*
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feature-client Feature client.
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Copyright (c) 2014-2015 National Marrow Donor Program (NMDP)
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This library is free software; you can redistribute it and/or modify it
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under the terms of the GNU Lesser General Public License as published
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by the Free Software Foundation; either version 3 of the License, or (at
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your option) any later version.
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This library is distributed in the hope that it will be useful, but WITHOUT
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ANY WARRANTY; with out even the implied warranty of MERCHANTABILITY or
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FITNESS FOR A PARTICULAR PURPOSE. See the GNU Lesser General Public
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License for more details.
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You should have received a copy of the GNU Lesser General Public License
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along with this library; if not, write to the Free Software Foundation,
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Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA.
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> http://www.gnu.org/licenses/lgpl.html
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*/

‎client/pom.xml

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<?xml version="1.0" encoding="UTF-8"?>
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<!--
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feature-client Feature client.
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Copyright (c) 2014-2015 National Marrow Donor Program (NMDP)
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This library is free software; you can redistribute it and/or modify it
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under the terms of the GNU Lesser General Public License as published
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by the Free Software Foundation; either version 3 of the License, or (at
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your option) any later version.
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This library is distributed in the hope that it will be useful, but WITHOUT
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ANY WARRANTY; with out even the implied warranty of MERCHANTABILITY or
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FITNESS FOR A PARTICULAR PURPOSE. See the GNU Lesser General Public
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License for more details.
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You should have received a copy of the GNU Lesser General Public License
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along with this library; if not, write to the Free Software Foundation,
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Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA.
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> http://www.gnu.org/licenses/lgpl.html
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-->
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<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
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<modelVersion>4.0.0</modelVersion>
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<packaging>jar</packaging>
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<parent>
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<groupId>org.nmdp.service</groupId>
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<artifactId>feature-multimodule</artifactId>
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<version>1.0-SNAPSHOT</version>
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</parent>
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<artifactId>feature-client</artifactId>
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<name>feature-client</name>
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<description>Feature client.</description>
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<dependencyManagement>
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<dependencies>
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<dependency>
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<groupId>org.nmdp.service</groupId>
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<artifactId>feature-resource</artifactId>
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<version>${project.version}</version>
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</dependency>
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</dependencies>
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</dependencyManagement>
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<dependencies>
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<dependency>
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<groupId>com.squareup.retrofit</groupId>
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<artifactId>converter-jackson</artifactId>
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<scope>compile</scope>
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</dependency>
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<dependency>
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<groupId>com.squareup.retrofit</groupId>
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<artifactId>retrofit</artifactId>
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<scope>compile</scope>
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</dependency>
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<dependency>
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<groupId>io.reactivex</groupId>
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<artifactId>rxjava</artifactId>
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<scope>compile</scope>
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</dependency>
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<dependency>
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<groupId>junit</groupId>
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<artifactId>junit</artifactId>
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<scope>test</scope>
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</dependency>
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<dependency>
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<groupId>org.nmdp.service</groupId>
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<artifactId>feature-resource</artifactId>
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<scope>compile</scope>
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</dependency>
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<dependency>
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<groupId>com.google.code.findbugs</groupId>
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<artifactId>jsr305</artifactId>
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<scope>compile</scope>
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</dependency>
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</dependencies>
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</project>

‎client/src/main/java/org/nmdp/service/feature/client/EndpointUrl.java

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/*
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feature-client Feature client.
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Copyright (c) 2014-2015 National Marrow Donor Program (NMDP)
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This library is free software; you can redistribute it and/or modify it
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under the terms of the GNU Lesser General Public License as published
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by the Free Software Foundation; either version 3 of the License, or (at
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your option) any later version.
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This library is distributed in the hope that it will be useful, but WITHOUT
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ANY WARRANTY; with out even the implied warranty of MERCHANTABILITY or
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FITNESS FOR A PARTICULAR PURPOSE. See the GNU Lesser General Public
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License for more details.
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You should have received a copy of the GNU Lesser General Public License
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along with this library; if not, write to the Free Software Foundation,
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Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA.
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> http://www.gnu.org/licenses/lgpl.html
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*/
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package org.nmdp.service.feature.client;
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import static java.lang.annotation.RetentionPolicy.RUNTIME;
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import static java.lang.annotation.ElementType.PARAMETER;
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import static java.lang.annotation.ElementType.FIELD;
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import static java.lang.annotation.ElementType.METHOD;
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import java.lang.annotation.Target;
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import java.lang.annotation.Retention;
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import com.google.inject.BindingAnnotation;
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/**
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* Endpoint URL binding annotation.
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*/
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@BindingAnnotation @Target({ FIELD, PARAMETER, METHOD }) @Retention(RUNTIME)
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public @interface EndpointUrl {
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// empty
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}

‎client/src/main/java/org/nmdp/service/feature/client/FeatureService.java

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/*
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feature-client Feature client.
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Copyright (c) 2014-2015 National Marrow Donor Program (NMDP)
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This library is free software; you can redistribute it and/or modify it
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under the terms of the GNU Lesser General Public License as published
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by the Free Software Foundation; either version 3 of the License, or (at
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your option) any later version.
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This library is distributed in the hope that it will be useful, but WITHOUT
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ANY WARRANTY; with out even the implied warranty of MERCHANTABILITY or
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FITNESS FOR A PARTICULAR PURPOSE. See the GNU Lesser General Public
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License for more details.
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You should have received a copy of the GNU Lesser General Public License
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along with this library; if not, write to the Free Software Foundation,
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Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA.
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> http://www.gnu.org/licenses/lgpl.html
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*/
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package org.nmdp.service.feature.client;
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import org.nmdp.service.feature.Feature;
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import org.nmdp.service.feature.resource.FeatureRequest;
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import retrofit.http.Body;
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import retrofit.http.GET;
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import retrofit.http.POST;
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import retrofit.http.Query;
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import rx.Observable;
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/**
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* Feature service client.
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*/
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public interface FeatureService {
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@GET("/features")
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Feature getFeature(@Query("locus") String locus,
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@Query("term") String term,
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@Query("rank") int rank,
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@Query("accession") long accession);
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@POST("/features")
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Feature createFeature(@Body FeatureRequest featureRequest);
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@POST("/features")
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Observable<Feature> createFeatureObservable(@Body FeatureRequest featureRequest);
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}

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