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run_donttest and run_dontrun do not work with fresh #2287

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cimentadaj opened this issue Oct 12, 2020 · 1 comment
Closed

run_donttest and run_dontrun do not work with fresh #2287

cimentadaj opened this issue Oct 12, 2020 · 1 comment

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@cimentadaj
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I'm using run_examples and I'm trying to run all examples in a fresh session. Seems that run and test are deprecated but are the only option to running all tests with fresh:

devtools::run_examples(fresh = TRUE)
#> Error in eval(substitute(function() devtools::run_examples(pkg = path,  : 
#>   argument "test" is missing, with no default

devtools::run_examples(run_donttest = TRUE, run_dontrun = TRUE, fresh = TRUE)
#> Error in eval(substitute(function() devtools::run_examples(pkg = path,  : 
#>   argument "test" is missing, with no default

devtools::run_examples(run = TRUE, test = TRUE, fresh = TRUE)
# works

# Note that this happens only when fresh = TRUE
devtools::run_examples(run_donttest = TRUE, run_dontrun = TRUE)
# Works

SI:

─ Session info ───────────────────────────────────────────────────────────────
 setting  value                       
 version  R version 4.0.2 (2020-06-22)
 os       Ubuntu 20.04.1 LTS          
 system   x86_64, linux-gnu           
 ui       X11                         
 language (EN)                        
 collate  en_US.UTF-8                 
 ctype    en_US.UTF-8                 
 tz       Europe/Berlin               
 date     2020-10-12                  

─ Packages ───────────────────────────────────────────────────────────────────
 ! package           * version    date       lib
   assertthat          0.2.1      2019-03-21 [2]
   backports           1.1.10     2020-09-15 [2]
   bitops              1.0-6      2013-08-17 [2]
   callr               3.4.4      2020-09-07 [2]
   cli                 2.0.2      2020-02-28 [2]
   clipr               0.7.0      2019-07-23 [2]
   crayon              1.3.4      2017-09-16 [2]
   data.table          1.13.0     2020-07-24 [2]
   desc                1.2.0      2018-05-01 [2]
   devtools            2.3.2      2020-09-18 [2]
   digest              0.6.25     2020-02-23 [2]
   dplyr               1.0.2      2020-08-18 [2]
   ellipsis            0.3.1      2020-05-15 [2]
   evaluate            0.14       2019-05-28 [2]
   fansi               0.4.1      2020-01-08 [2]
 R fertestr            0.0.0.9000 <NA>       [?]
   fs                  1.5.0      2020-07-31 [2]
   gbRd                0.4-11     2012-10-01 [2]
   generics            0.0.2      2018-11-29 [2]
   glue                1.4.2      2020-08-27 [2]
   htmltools           0.5.0      2020-06-16 [2]
   knitr               1.30       2020-09-22 [2]
   lattice             0.20-41    2020-04-02 [4]
   lifecycle           0.2.0      2020-03-06 [2]
   lubridate           1.7.9      2020-06-08 [2]
   magrittr            1.5        2014-11-22 [2]
   memoise             1.1.0      2017-04-21 [2]
   minpack.lm          1.2-1      2016-11-20 [2]
   MortalityEstimate   0.9.10     2020-10-12 [1]
   MortalityLaws       1.8.5      2020-09-16 [2]
   pbapply             1.4-3      2020-08-18 [2]
   pillar              1.4.6      2020-07-10 [2]
   pkgbuild            1.1.0      2020-07-13 [2]
   pkgconfig           2.0.3      2019-09-22 [2]
   pkgload             1.1.0      2020-05-29 [2]
   prettyunits         1.1.1      2020-01-24 [2]
   processx            3.4.4      2020-09-03 [2]
   ps                  1.3.4      2020-08-11 [2]
   purrr               0.3.4      2020-04-17 [2]
   R6                  2.4.1      2019-11-12 [2]
   rbibutils           1.3        2020-10-05 [2]
   Rcpp                1.0.5      2020-07-06 [2]
   RCurl               1.98-1.2   2020-04-18 [2]
   Rdpack              2.0        2020-10-06 [2]
   remotes             2.2.0      2020-07-21 [2]
   reprex              0.3.0      2019-05-16 [2]
   rlang               0.4.8      2020-10-08 [1]
   rmarkdown           2.4        2020-09-30 [2]
   roxygen2            7.1.1      2020-06-27 [2]
   rprojroot           1.3-2      2018-01-03 [2]
   rstudioapi          0.11       2020-02-07 [2]
   sessioninfo         1.1.1      2018-11-05 [2]
   stringi             1.5.3      2020-09-09 [2]
   stringr             1.4.0      2019-02-10 [2]
   testthat            2.3.2      2020-03-02 [2]
   tibble              3.0.4.9000 2020-10-12 [1]
   tidyr               1.1.2      2020-08-27 [2]
   tidyselect          1.1.0      2020-05-11 [2]
   usethis             1.6.3      2020-09-17 [2]
   vctrs               0.3.4      2020-08-29 [2]
   whisker             0.4        2019-08-28 [2]
   withr               2.3.0      2020-09-22 [2]
   wpp2019             1.1-1      2020-01-31 [1]
   xfun                0.18       2020-09-29 [2]
   xml2                1.3.2      2020-04-23 [2]
 source                                      
 CRAN (R 4.0.0)                              
 CRAN (R 4.0.2)                              
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 CRAN (R 4.0.1)                              
 CRAN (R 4.0.0)                              
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 CRAN (R 4.0.0)                              
 Github (mpascariu/MortalityEstimate@1e8f944)
 CRAN (R 4.0.2)                              
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 Github (tidyverse/tibble@57d5b22)           
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[1] /home/jorge/R/x86_64-pc-linux-gnu-library/4.0
[2] /usr/local/lib/R/site-library
[3] /usr/lib/R/site-library
[4] /usr/lib/R/library

 R ── Package was removed from disk.
@jimhester
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This was tracked and fixed in #2264. It is not yet in the current CRAN release, but will be in the next one.

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@jimhester @cimentadaj