Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Improve readme #96

Closed
sbliven opened this issue Dec 11, 2018 · 0 comments
Closed

Improve readme #96

sbliven opened this issue Dec 11, 2018 · 0 comments

Comments

@sbliven
Copy link
Collaborator

sbliven commented Dec 11, 2018

Improve the README with clear installation and usage instructions for CE-Symm.

A user reported being unable to run CE-Symm:

Unfortunately the software still does not run for me and hangs when analyze is clicked. Could the readme.md be updated to include any dependencies?

I downloaded the software from
https://github.com/rcsb/symmetry/releases/tag/cesymm-2.0.0

I tried installing on both mac and linux. In both cases the initial box pops up, and I can select custom file, but when I click analyze the software does nothing.

For mac I installed the following additional software steps.
I updated my java runtime environment to Java8 update 191
I installed biojava-core-5.1.1.java in Library/Java/Extensions/biojava-core-5.1.1.jar

On mac the software hangs and it seems like the analyze button does nothing.

On Linux I get the following error:
Exception in thread "Thread-25" java.lang.IllegalArgumentException: Empty Atom array given.

This is probably primarily a documentation problem (for instance, I'm not sure where the Extensions directory came from).

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

2 participants