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Update NN model
1 parent 9af49be commit 4aa0cab

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3 files changed

+9
-2
lines changed

3 files changed

+9
-2
lines changed

data/CMakeLists.txt

+3
Original file line numberDiff line numberDiff line change
@@ -7,6 +7,9 @@ set(COMPILED_RESOURCES
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predict_coding_acc9260_56x96.model
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predict_coding_acc9623_57x32x64.model
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predict_coding_acc9540_57x32x64.model
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predict_coding_acc9642_57x32x64.model
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predict_coding_acc9598_57x32x64.model
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predict_coding_acc9743_57x32x64.model
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)
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set(GENERATED_OUTPUT_HEADERS "")
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src/assembler/filternoncoding.cpp

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Original file line numberDiff line numberDiff line change
@@ -11,7 +11,11 @@
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#include "LocalParameters.h"
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#include "kerasify/keras_model.h"
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#include "predict_coding_acc9540_57x32x64.model.h"
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//#include "predict_coding_acc9540_57x32x64.model.h"
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//#include "predict_coding_acc9642_57x32x64.model.h"
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//#include "predict_coding_acc9598_57x32x64.model.h"
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#include "predict_coding_acc9743_57x32x64.model.h"
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//#include "predict_coding_acc9260_56x96.model.h"
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//#include "predict_coding_acc9623_57x32x64.model.h"
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@@ -34,7 +38,7 @@ int filternoncoding(int argc, const char **argv, const Command& command) {
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// Initialize model.
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KerasModel model;
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// model.LoadModel(std::string((const char *)predict_coding_acc9623_57x32x64_model, predict_coding_acc9623_57x32x64_model_len));
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model.LoadModel(std::string((const char *)predict_coding_acc9540_57x32x64_model, predict_coding_acc9540_57x32x64_model_len));
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model.LoadModel(std::string((const char *)predict_coding_acc9743_57x32x64_model, predict_coding_acc9743_57x32x64_model_len));
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SubstitutionMatrix subMat(par.scoringMatrixFile.c_str(), 2.0, 0.0);
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ReducedMatrix redMat7(subMat.probMatrix, subMat.subMatrixPseudoCounts, 7, subMat.getBitFactor());

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