You signed in with another tab or window. Reload to refresh your session.You signed out in another tab or window. Reload to refresh your session.You switched accounts on another tab or window. Reload to refresh your session.Dismiss alert
I was testing localcolabfold 1.5.5 with a list of protein complexes. colabfold_search with GPU seems to produce all a3m files without any issues but when I tried to use CPU, I got errors "corrupted size vs. prev_size".
Then I tried individual complexes and some worked while others didn't. I got error message "malloc(): invalid size (unsorted)" during expandaln. I've tried with or without indices, indices built with different hardware configurations and mmseqs15 but none of them resolved the issue. An example is attached.
I was testing localcolabfold 1.5.5 with a list of protein complexes. colabfold_search with GPU seems to produce all a3m files without any issues but when I tried to use CPU, I got errors "corrupted size vs. prev_size".
Then I tried individual complexes and some worked while others didn't. I got error message "malloc(): invalid size (unsorted)" during expandaln. I've tried with or without indices, indices built with different hardware configurations and mmseqs15 but none of them resolved the issue. An example is attached.
colabfold_search-62781089.txt
complex2.txt
localcolabfold_msa.txt
The text was updated successfully, but these errors were encountered: