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Merge pull request #3 from jhnnsnk/nest_docs_conn
Remove template, minor edits
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doc/htmldoc/synapses/connection_management.rst

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This documentation not only describes how to define network connectivity in NEST, but also provides details on connectivity concepts.
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The article "Connectivity concepts in neuronal network modeling" [1]_ serves as a permanent reference for a number of connection rules and we suggest to cite it if rules defined there are used.
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This documentation instead represents a living reference for these rules, and deviations from and extensions to what is described in the article are here highlighted in green.
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This documentation instead represents a living reference for these rules, and deviations from and extensions to what is described in the article will be highlighted.
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.. The same article also introduces a graphical notation for neuronal network diagrams which is curated in the documentation of NEST Desktop. TODO ADD LINK WHEN IT EXISTS
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.. The same article also introduces a graphical notation for neuronal network diagrams which will be curated in the documentation of :doc:`NEST Desktop <desktop:user/usage-advanced/network-graph>`.
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:ref:`spatial_networks` are described on a separate page.
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.. _conn_builder_conngen:
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Connection generator interface
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~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
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------------------------------
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.. admonition:: Availability
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.. _tripartite_connectivity:
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Tripartite Bernoulli with pool
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~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
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------------------------------
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For each possible pair of nodes from a source ``NodeCollection`` (e.g., a neuron population ``S``)
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and a target ``NodeCollection`` (e.g., a neuron population ``T``), a connection is

doc/htmldoc/synapses/handling_connections.rst

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.. _handling_connections:
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How to handle inspect and modify connections
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============================================
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How to inspect and modify connections
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=====================================
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Here, we describe how to inspect and modify already created connections.
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:ref:`connection_management` describes how to create new connections and :ref:`synapse_spec` how to parameterize synapses as they are created.

doc/htmldoc/templates/page.html

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