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Added pyesorex tests to CI for all available recipes #105

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Feb 11, 2025
Merged

Added pyesorex tests to CI for all available recipes #105

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21 changes: 19 additions & 2 deletions .github/workflows/run_edps.yaml
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Original file line number Diff line number Diff line change
Expand Up @@ -54,18 +54,36 @@ jobs:
export SOF_DATA="$(pwd)/METIS_Pipeline_Test_Data/small202402/outputSmall/"
export SOF_DIR="$(pwd)/METIS_Pipeline_Test_Data/small202402/sofFiles/"
export PYESOREX_OUTPUT_DIR="$SOF_DATA"

# LIST RECIPES
pyesorex --recipes

# DET RECIPES
pyesorex metis_det_lingain "${SOF_DIR}/metis_det_lingain.lm.sof"
pyesorex metis_det_dark "${SOF_DIR}/metis_det_dark.lm.sof"

# IMG LM RECIPES
pyesorex metis_lm_img_distortion "${SOF_DIR}/metis_lm_img_distortion.sof"
pyesorex metis_lm_img_flat "${SOF_DIR}/metis_lm_img_flat.lamp.sof"
pyesorex metis_lm_img_basic_reduce "${SOF_DIR}/metis_lm_img_basic_reduce.std.sof"
pyesorex metis_lm_img_basic_reduce "${SOF_DIR}/metis_lm_img_basic_reduce.sci.sof"
pyesorex metis_lm_img_basic_reduce "${SOF_DIR}/metis_lm_img_basic_reduce.sky.sof"
pyesorex metis_lm_img_background "${SOF_DIR}/metis_lm_img_background.std.sof"
pyesorex metis_lm_img_background "${SOF_DIR}/metis_lm_img_background.sci.sof"
pyesorex metis_lm_img_std_process "${SOF_DIR}/metis_lm_img_std_process.sof"
pyesorex metis_lm_img_calibrate "${SOF_DIR}/metis_lm_img_calibrate.sof"
pyesorex metis_lm_img_sci_postprocess "${SOF_DIR}/metis_lm_img_sci_postprocess.sof"

# IFU RECIPES
pyesorex metis_ifu_distortion "${SOF_DIR}/metis_ifu_distortion.sof"
pyesorex metis_ifu_wavecal "${SOF_DIR}/metis_ifu_wavecal.sof"
pyesorex metis_ifu_rsrf "${SOF_DIR}/metis_ifu_rsrf.sof"
pyesorex metis_ifu_reduce "${SOF_DIR}/metis_ifu_reduce.std.sof"
pyesorex metis_ifu_reduce "${SOF_DIR}/metis_ifu_reduce.sci.sof"
pyesorex metis_ifu_telluric "${SOF_DIR}/metis_ifu_telluric.std.sof"
pyesorex metis_ifu_telluric "${SOF_DIR}/metis_ifu_telluric.sci.sof"
pyesorex metis_ifu_calibrate "${SOF_DIR}/metis_ifu_calibrate.sof"
pyesorex metis_ifu_postprocess "${SOF_DIR}/metis_ifu_postprocess.sof"

# CAL RECIPES
pyesorex metis_cal_chophome "${SOF_DIR}/metis_cal_chophome.sof"
Expand All @@ -84,5 +102,4 @@ jobs:
edps -lw
edps -w metis.metis_wkf -i $SOF_DATA -c
edps -w metis.metis_wkf -i $SOF_DATA -lt
edps -w metis.metis_wkf -i $SOF_DATA -m all | tee edps.stdout.txt
! grep "'FAILED'" edps.stdout.txt
edps -w metis.metis_wkf -i $SOF_DATA -m all | tee edps.stdout.txt ! grep "'FAILED'" edps.stdout.txt