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New flag for mip to define contigs to use/skip in analysis when needed #509

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emiliaol opened this issue Jun 1, 2018 · 1 comment
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New flag for mip to define contigs to use/skip in analysis when needed #509

emiliaol opened this issue Jun 1, 2018 · 1 comment

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@emiliaol
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emiliaol commented Jun 1, 2018

Sometimes there is a need to chose which contigs to evaluate in mip. Especially in the VariantAnnotationBlock.
henrikstranneheim added a commit that referenced this issue Jun 11, 2018
@henrikstranneheim
New flag for mip to define contigs to use/skip in analysis when needed.
7aae63d 
Fix #509

- Added flag '--exc [list]' to analyse CLI
- Added test for contig mutator subs
@henrikstranneheim
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Done!

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@henrikstranneheim @emiliaol