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tophat: Build a bottle for Linuxbrew #256

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tophat: Build a bottle for Linuxbrew #256

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@sjackman sjackman added the ready label Jun 30, 2016
@sjackman sjackman self-assigned this Jun 30, 2016
@sjackman sjackman mentioned this pull request Jun 30, 2016
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sjackman commented Jun 30, 2016 •
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[2016-06-30 18:08:18] Checking for Bowtie
/home/linuxbrew/.linuxbrew/bin/../Cellar/bowtie2/2.2.9/bin/bowtie2-align-s: error while loading shared libraries: libtbb.so.2: cannot open shared object file: No such file or directory

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==> brew audit homebrew/science/tophat
Error: 1 problem in 1 formula
homebrew/science/tophat:
  * Non-executables were installed to "/home/linuxbrew/.linuxbrew/Cellar/tophat/2.1.1/bin"
    The offending files are:
      /home/linuxbrew/.linuxbrew/Cellar/tophat/2.1.1/bin/samtools_0.1.18
      /home/linuxbrew/.linuxbrew/Cellar/tophat/2.1.1/bin/prep_reads
      /home/linuxbrew/.linuxbrew/Cellar/tophat/2.1.1/bin/gtf_to_fasta
      /home/linuxbrew/.linuxbrew/Cellar/tophat/2.1.1/bin/fix_map_ordering
      /home/linuxbrew/.linuxbrew/Cellar/tophat/2.1.1/bin/bam2fastx
      /home/linuxbrew/.linuxbrew/Cellar/tophat/2.1.1/bin/segment_juncs
      /home/linuxbrew/.linuxbrew/Cellar/tophat/2.1.1/bin/gtf_juncs
      /home/linuxbrew/.linuxbrew/Cellar/tophat/2.1.1/bin/juncs_db
      /home/linuxbrew/.linuxbrew/Cellar/tophat/2.1.1/bin/long_spanning_reads
      /home/linuxbrew/.linuxbrew/Cellar/tophat/2.1.1/bin/bam_merge
      /home/linuxbrew/.linuxbrew/Cellar/tophat/2.1.1/bin/map2gtf
      /home/linuxbrew/.linuxbrew/Cellar/tophat/2.1.1/bin/tophat_reports
      /home/linuxbrew/.linuxbrew/Cellar/tophat/2.1.1/bin/sam_juncs
==> FAILED

@sjackman sjackman closed this in f372e47 Jul 1, 2016
@sjackman sjackman removed the ready label Jul 1, 2016
@sjackman sjackman deleted the bottle-tophat branch July 1, 2016 00:01
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