Code

Adding a few rof notebooks#126

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mnlevy1981 merged 91 commits intoNCAR:mainNCAR/CUPiD:mainfrom nmizukami:main_adding_rofnmizukami/CUPiD:main_adding_rofCopy head branch name to clipboardNov 21, 2024

Commits

Commits on Aug 22, 2024

• added rof notebook config example

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• added rof notebooks with ancillary data and scripts

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Commits on Aug 23, 2024

• reformatting with pre-commit

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• change one of key names in setup and notebook changes associated with this, and change from pre-commit reformatting

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• Update config.yml to include rof in timeseries and book_toc

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• Update run.py to include rof

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• updates for pre-commit

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• replace math sqrt with numpy sqrt

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• forgot uncommenting other component configs

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Commits on Sep 12, 2024

• adding new script to compute various flow metrics

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Commits on Sep 14, 2024

• remove unused packages, rename setup variables

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• added one new rof notebook

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Commits on Sep 19, 2024

• update readme and config for clarification purposes

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• fix a few other failed checks from pre-commit

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• added myCount function in metrics.py. it was missing

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• fixed all checks

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• removed commented out scripts

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• added comments for each def with docstrings

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Commits on Sep 20, 2024

• fix river_runoff underscore

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• code style

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• initial logging for print statements that we added

  

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• pre commits

  

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• formatting

  

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• remove filename

  

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• include log level in config file and move to utils

  

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• pass logger argument in timeseries and update warnings.warn to logger.warning

  

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• precommit updates

  

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• change default logging level to info since that's probably better while in development

  

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• initial implementation of config file documentation

  

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• adjust spacing

  

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• loop through files including config.md in conf.py

  

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• Some clean-up for key_metrics

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• Clean up glacier notebook

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• Case 104 has 21 more years of data

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• Use hide-input and hide-cell tags

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• key_metrics generates time-series for both cases

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• Update time axis for glacier plot

  

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• Create contributors.md

  

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• Add github handles to contributors.md

  

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• Add hyperlinks to contributors.md

  

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• add one more github handle...

  

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• updates to include on github.io page and Lev's affiliation

  

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• Update Anna's affiliation

  

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• Include clearer instructions on adding a name to contributors.md

  

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• remove config from loop in conf.py since config.md is in docs dir

  

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• images now rendering correctly

  

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• update to use key metrics images

  

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• include docs in gitignore

  

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• fix for configuration file documentation images

  

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• move images to docs/_static/images/config

  

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• updates from review

  

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• include else statement in case of log level with typo

  

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• add quotes around log level in config!

  

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• add quotes in coupled_model config

  

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• Remove manage externals

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• Add ADF and mom6-tools as submodules

  

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• Update documentation to remove manage_externals

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• Don't name specific directories in externals/

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• add var element in rof timeseries

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• Merge branch 'NCAR:main' into main_adding_rof

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Commits on Oct 1, 2024

• added ocean_discharge notebook in chapter. added a comment on case input.

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• Merge remote-tracking branch 'nmizukami/main_adding_rof' into main_adding_rof

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• remove case_dir input b/c it is not used

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• Cleanup based on review comments e.g., remove empty cells, etcs

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Commits on Oct 11, 2024

• change dask setupt

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• rof updates

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• rof sepcific setup update

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• automated reformat

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• just temporal comment out

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• auto-formatting

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Commits on Oct 13, 2024

• uncomment ocean_discharge notebook config

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• key values updates and remove some items

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• automated format fix on ocean-discharge notebook

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Commits on Oct 18, 2024

• rof specific setup changes

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• a few rof parameters added in config.yml

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• auto reformatting

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Commits on Oct 19, 2024

• auto formatting

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Commits on Oct 27, 2024

• use empty string for analysis_name in config.yml

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Commits on Oct 29, 2024

• remove rof config

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• notebook renamed

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• auto formatting

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• changes according to notebook name changes

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Commits on Oct 31, 2024

• Update config.yml in coupled model to remove rof notebooks that are not being computed

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Commits on Nov 14, 2024

• auto formatting

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• auto formatting for setup.yaml

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• auto formatting for notebook

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• fixed typoes

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• remove corr function

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Commits on Nov 21, 2024

• setup paths change from personal to common places

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• get observed flow data even if analysis_period is outside obs period

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• auto formatting

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