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[Bug] failed to do checkpoint. com.google.gson.JsonParseException: cannot deserialize interface org.apache.doris.datasource.CatalogIf because it does not define a field named clazz #23366

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zhengshubin opened this issue Aug 23, 2023 · 0 comments · Fixed by #24681
Closed
2 of 3 tasks

[Bug] failed to do checkpoint. com.google.gson.JsonParseException: cannot deserialize interface org.apache.doris.datasource.CatalogIf because it does not define a field named clazz #23366

zhengshubin opened this issue Aug 23, 2023 · 0 comments · Fixed by #24681

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@zhengshubin
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  • I had searched in the issues and found no similar issues.

Version

2.0.0

What's Wrong?

fe.warn.log output frequently:

2023-08-23 15:04:21,538 WARN (leaderCheckpointer|86) [Checkpoint.runAfterCatalogReady():79] failed to do checkpoint.
org.apache.doris.common.CheckpointException: java.lang.reflect.InvocationTargetException
at org.apache.doris.master.Checkpoint.doCheckpoint(Checkpoint.java:160) ~[doris-fe.jar:1.2-SNAPSHOT]
at org.apache.doris.master.Checkpoint.runAfterCatalogReady(Checkpoint.java:77) ~[doris-fe.jar:1.2-SNAPSHOT]
at org.apache.doris.common.util.MasterDaemon.runOneCycle(MasterDaemon.java:58) ~[doris-fe.jar:1.2-SNAPSHOT]
at org.apache.doris.common.util.Daemon.run(Daemon.java:116) ~[doris-fe.jar:1.2-SNAPSHOT]
Caused by: java.io.IOException: java.lang.reflect.InvocationTargetException
at org.apache.doris.persist.meta.MetaReader.read(MetaReader.java:119) ~[doris-fe.jar:1.2-SNAPSHOT]
at org.apache.doris.catalog.Env.loadImage(Env.java:1733) ~[doris-fe.jar:1.2-SNAPSHOT]
at org.apache.doris.master.Checkpoint.doCheckpoint(Checkpoint.java:149) ~[doris-fe.jar:1.2-SNAPSHOT]
... 3 more
Caused by: java.lang.reflect.InvocationTargetException
at sun.reflect.GeneratedMethodAccessor41.invoke(Unknown Source) ~[?:?]
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) ~[?:1.8.0_212]
at java.lang.reflect.Method.invoke(Method.java:498) ~[?:1.8.0_212]
at org.apache.doris.persist.meta.MetaReader.read(MetaReader.java:116) ~[doris-fe.jar:1.2-SNAPSHOT]
at org.apache.doris.catalog.Env.loadImage(Env.java:1733) ~[doris-fe.jar:1.2-SNAPSHOT]
at org.apache.doris.master.Checkpoint.doCheckpoint(Checkpoint.java:149) ~[doris-fe.jar:1.2-SNAPSHOT]
... 3 more
Caused by: com.google.gson.JsonParseException: cannot deserialize interface org.apache.doris.datasource.CatalogIf because it does not define a field named clazz
at org.apache.doris.persist.gson.RuntimeTypeAdapterFactory$1.read(RuntimeTypeAdapterFactory.java:280) ~[doris-fe.jar:1.2-SNAPSHOT]
at com.google.gson.TypeAdapter$1.read(TypeAdapter.java:199) ~[gson-2.8.9.jar:?]
at com.google.gson.internal.bind.TypeAdapterRuntimeTypeWrapper.read(TypeAdapterRuntimeTypeWrapper.java:41) ~[gson-2.8.9.jar:?]
at com.google.gson.internal.bind.MapTypeAdapterFactory$Adapter.read(MapTypeAdapterFactory.java:187) ~[gson-2.8.9.jar:?]
at com.google.gson.internal.bind.MapTypeAdapterFactory$Adapter.read(MapTypeAdapterFactory.java:145) ~[gson-2.8.9.jar:?]
at org.apache.doris.persist.gson.GsonUtils$PostProcessTypeAdapterFactory$1.read(GsonUtils.java:508) ~[doris-fe.jar:1.2-SNAPSHOT]
at com.google.gson.internal.bind.ReflectiveTypeAdapterFactory$1.read(ReflectiveTypeAdapterFactory.java:131) ~[gson-2.8.9.jar:?]
at com.google.gson.internal.bind.ReflectiveTypeAdapterFactory$Adapter.read(ReflectiveTypeAdapterFactory.java:222) ~[gson-2.8.9.jar:?]
at org.apache.doris.persist.gson.GsonUtils$PostProcessTypeAdapterFactory$1.read(GsonUtils.java:508) ~[doris-fe.jar:1.2-SNAPSHOT]
at com.google.gson.Gson.fromJson(Gson.java:963) ~[gson-2.8.9.jar:?]
at com.google.gson.Gson.fromJson(Gson.java:928) ~[gson-2.8.9.jar:?]
at com.google.gson.Gson.fromJson(Gson.java:877) ~[gson-2.8.9.jar:?]
at com.google.gson.Gson.fromJson(Gson.java:848) ~[gson-2.8.9.jar:?]
at org.apache.doris.datasource.CatalogMgr.read(CatalogMgr.java:107) ~[doris-fe.jar:1.2-SNAPSHOT]
at org.apache.doris.catalog.Env.loadCatalog(Env.java:1997) ~[doris-fe.jar:1.2-SNAPSHOT]
at sun.reflect.GeneratedMethodAccessor41.invoke(Unknown Source) ~[?:?]
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) ~[?:1.8.0_212]
at java.lang.reflect.Method.invoke(Method.java:498) ~[?:1.8.0_212]
at org.apache.doris.persist.meta.MetaReader.read(MetaReader.java:116) ~[doris-fe.jar:1.2-SNAPSHOT]
at org.apache.doris.catalog.Env.loadImage(Env.java:1733) ~[doris-fe.jar:1.2-SNAPSHOT]
at org.apache.doris.master.Checkpoint.doCheckpoint(Checkpoint.java:149) ~[doris-fe.jar:1.2-SNAPSHOT]
... 3 more

What You Expected?

Don't output this

How to Reproduce?

No response

Anything Else?

No response

Are you willing to submit PR?

  • Yes I am willing to submit a PR!

Code of Conduct
@morningman morningman mentioned this issue Sep 20, 2023
Merged
yiguolei pushed a commit that referenced this issue Sep 21, 2023
@morningman
[fix](fe-meta) fix paimon file catalog meta issue and replication num…
5e82aeb 
… analysis issue (#24681)

Fix 2 issues:

The replication num analysis will throw exception when there is no BE alive when FE restart.
org.apache.doris.common.AnalysisException: errCode = 2, detailMessage = errCode = 2, detailMessage = replication num should be less than the number of available backends. replication num is 1, available backend num is 0
        at org.apache.doris.common.util.PropertyAnalyzer.analyzeReplicaAllocation(PropertyAnalyzer.java:1018) ~[doris-fe.jar:1.2-SNAPSHOT]
        at org.apache.doris.catalog.TableProperty.buildReplicaAllocation(TableProperty.java:483) ~[doris-fe.jar:1.2-SNAPSHOT]
        at org.apache.doris.catalog.TableProperty.read(TableProperty.java:529) ~[doris-fe.jar:1.2-SNAPSHOT]
        at org.apache.doris.catalog.OlapTable.readFields(OlapTable.java:1370) ~[doris-fe.jar:1.2-SNAPSHOT]
        at org.apache.doris.catalog.Table.read(Table.java:383) ~[doris-fe.jar:1.2-SNAPSHOT]
        at org.apache.doris.catalog.Database.readFields(Database.java:631) ~[doris-fe.jar:1.2-SNAPSHOT]
        at org.apache.doris.datasource.InternalCatalog.loadDb(InternalCatalog.java:3075) ~[doris-fe.jar:1.2-SNAPSHOT]
        at org.apache.doris.catalog.Env.loadDb(Env.java:1764) ~[doris-fe.jar:1.2-SNAPSHOT]
        at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) ~[?:1.8.0_341]
        at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) ~[?:1.8.0_341]
        at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) ~[?:1.8.0_341]
        at java.lang.reflect.Method.invoke(Method.java:498) ~[?:1.8.0_341]
        at org.apache.doris.persist.meta.MetaReader.read(MetaReader.java:116) ~[doris-fe.jar:1.2-SNAPSHOT]
        at org.apache.doris.catalog.Env.loadImage(Env.java:1701) ~[doris-fe.jar:1.2-SNAPSHOT]
        at org.apache.doris.master.Checkpoint.doCheckpoint(Checkpoint.java:130) ~[doris-fe.jar:1.2-SNAPSHOT]
        at org.apache.doris.master.Checkpoint.runAfterCatalogReady(Checkpoint.java:79) ~[doris-fe.jar:1.2-SNAPSHOT]
        at org.apache.doris.common.util.MasterDaemon.runOneCycle(MasterDaemon.java:58) ~[doris-fe.jar:1.2-SNAPSHOT]
        at org.apache.doris.common.util.Daemon.run(Daemon.java:116) ~[doris-fe.jar:1.2-SNAPSHOT]
Paimon File Catalog meta issue
Fix #23366
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