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mapping?parameter
Docker #148: Commit 98433d8 pushed by grexor
March 3, 2025 10:49 23m 42s main
March 3, 2025 10:49 23m 42s
adjusted mem for human mapping
Docker #147: Commit 7f7ab25 pushed by grexor
February 27, 2025 15:15 23m 13s main
February 27, 2025 15:15 23m 13s
samtools -@
Docker #146: Commit 739d4e0 pushed by grexor
February 25, 2025 14:28 22m 41s main
February 25, 2025 14:28 22m 41s
bamCoverage --numberOfProcessors max
Docker #145: Commit 073178e pushed by grexor
February 25, 2025 10:53 22m 39s main
February 25, 2025 10:53 22m 39s
jbrowse2 url fix
Docker #144: Commit 87702ff pushed by grexor
February 20, 2025 11:40 22m 19s main
February 20, 2025 11:40 22m 19s
Merge branch 'main' of github.com:bedapub/splicekit
Docker #143: Commit dd28670 pushed by grexor
February 20, 2025 09:55 22m 59s main
February 20, 2025 09:55 22m 59s
Merge pull request #95 from bedapub/main
Docker #142: Commit 931370a pushed by grexor
February 19, 2025 15:20 22m 28s dev
dev
February 19, 2025 15:20 22m 28s
docs
Docker #141: Commit b3c13ba pushed by grexor
February 19, 2025 15:15 23m 54s main
February 19, 2025 15:15 23m 54s
param -> outside
Docker #140: Commit 941ebd9 pushed by grexor
February 19, 2025 14:42 23m 54s main
February 19, 2025 14:42 23m 54s
def run
Docker #139: Commit 1bf2e00 pushed by grexor
February 19, 2025 12:48 24m 24s main
February 19, 2025 12:48 24m 24s
fixed bam/bai sm rules
Docker #138: Commit 68f3e3b pushed by grexor
February 19, 2025 12:34 23m 26s main
February 19, 2025 12:34 23m 26s
Added alignIntronMax parameter in the config.yaml file (passed to STAR)
Docker #137: Commit 188a2a3 pushed by grexor
February 18, 2025 16:33 23m 18s main
February 18, 2025 16:33 23m 18s
10k report limit
Docker #136: Commit 3f9d63a pushed by grexor
February 18, 2025 12:43 22m 39s main
February 18, 2025 12:43 22m 39s
bf
Docker #135: Commit e0fca07 pushed by grexor
February 18, 2025 11:53 22m 13s main
February 18, 2025 11:53 22m 13s
dreme needs ghostscript to create pngs
Docker #134: Commit 0144ec0 pushed by grexor
February 18, 2025 11:52 1m 6s main
February 18, 2025 11:52 1m 6s
def config.yaml file in run_snakemake scripts
Docker #133: Commit 5d24e23 pushed by grexor
February 18, 2025 09:51 22m 41s main
February 18, 2025 09:51 22m 41s
hostname config -> if not specified, use localhost for serving
Docker #132: Commit c149a7f pushed by grexor
February 17, 2025 15:34 23m 29s main
February 17, 2025 15:34 23m 29s
faster bootstrap
Docker #131: Commit 89b4703 pushed by grexor
February 17, 2025 12:13 21m 55s main
February 17, 2025 12:13 21m 55s
slurm_run
Docker #130: Commit 1950ec0 pushed by grexor
February 14, 2025 14:15 23m 33s main
February 14, 2025 14:15 23m 33s
update
Docker #129: Commit 45644b0 pushed by grexor
February 14, 2025 09:51 22m 24s main
February 14, 2025 09:51 22m 24s
mv -f
Docker #128: Commit 3122c1b pushed by grexor
February 14, 2025 09:24 23m 18s main
February 14, 2025 09:24 23m 18s
Merge pull request #92 from bedapub/main
Docker #127: Commit 57742e7 pushed by grexor
February 13, 2025 13:25 23m 31s dev
dev
February 13, 2025 13:25 23m 31s
do not specify jobs when running snakemake local
Docker #126: Commit 1acf2fa pushed by grexor
February 13, 2025 13:24 22m 8s main
February 13, 2025 13:24 22m 8s
Merge pull request #91 from bedapub/snakemake
Docker #125: Commit 79ef64f pushed by grexor
February 11, 2025 10:10 21m 58s main
February 11, 2025 10:10 21m 58s
samples
Docker #124: Commit c7d01d6 pushed by grexor
February 11, 2025 10:08 22m 30s snakemake
February 11, 2025 10:08 22m 30s