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@bihealth

Berlin Institute of Health

BIH Core Unit Bioinformatics & BIH HPC IT

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  1. sodar-server sodar-server Public

    SODAR: System for Omics Data Access and Retrieval

    Python 16 3

  2. sodar-core sodar-core Public

    SODAR Core: A Django-based framework for building scientific data management web apps

    Python 9 1

  3. scelvis scelvis Public

    🎇 SCelVis - web-based visualization of single-cell data. ➡️ ➡️ Demo ➡️➡️

    Python 21 5

  4. digestiflow-server digestiflow-server Public

    🍸 Web-based database system for flow cell management (incl. REST API)

    Python 15 3

  5. altamisa altamisa Public

    AltamISA: a Python API for ISA-Tab files

    Python 5 2

Repositories

Showing 10 of 178 repositories
  • sodar-server Public

    SODAR: System for Omics Data Access and Retrieval

    bihealth/sodar-server’s past year of commit activity
    Python 16 MIT 3 347 (6 issues need help) 0 Updated Mar 10, 2025
  • reev Public

    REEV: Explanation and Evaluation of Variants

    bihealth/reev’s past year of commit activity
    TypeScript 9 MIT 4 39 5 Updated Mar 10, 2025
  • cubi-tk Public

    CUBI Tooling for SODAR, VarFish et al.

    bihealth/cubi-tk’s past year of commit activity
    Python 5 MIT 5 45 3 Updated Mar 7, 2025
  • sodar-core Public

    SODAR Core: A Django-based framework for building scientific data management web apps

    bihealth/sodar-core’s past year of commit activity
    Python 9 MIT 1 264 (2 issues need help) 0 Updated Mar 7, 2025
  • snappy-pipeline Public

    SNAPPY Nucleic Acid Processing in Python

    bihealth/snappy-pipeline’s past year of commit activity
    Python 10 MIT 4 117 (2 issues need help) 23 Updated Mar 6, 2025
  • StemCNV-check Public
    bihealth/StemCNV-check’s past year of commit activity
    R 0 MIT 0 4 0 Updated Mar 5, 2025
  • kiosc-server Public
    bihealth/kiosc-server’s past year of commit activity
    Python 1 MIT 1 28 3 Updated Mar 5, 2025
  • dotty Public

    cdot-based transcript projections

    bihealth/dotty’s past year of commit activity
    Python 0 MIT 0 2 0 Updated Mar 3, 2025
  • sodar-docker-compose Public

    Setup SODAR using Docker Compose

    bihealth/sodar-docker-compose’s past year of commit activity
    Shell 3 MIT 3 14 (1 issue needs help) 1 Updated Mar 3, 2025
  • manuscript-sutherland-cytokines Public

    Supplementary materials for the paper

    bihealth/manuscript-sutherland-cytokines’s past year of commit activity
    TeX 0 0 0 0 Updated Feb 28, 2025
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