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Remove white space in process tags #792

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merged 2 commits into from
Nov 12, 2024
Merged

Remove white space in process tags #792

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d8e7eb6
Remove white spaces in process tags
d4straub Nov 12, 2024
08bafc9
update changelog
d4straub Nov 12, 2024
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1 change: 1 addition & 0 deletions CHANGELOG.md
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Expand Up @@ -15,6 +15,7 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0

### `Fixed`

- [#792](https://github.com/nf-core/ampliseq/pull/792) - Remove white spaces in process tags to avoid errors on some systems
- [#785](https://github.com/nf-core/ampliseq/pull/785) - Template update for nf-core/tools version 3.0.2
- [#786](https://github.com/nf-core/ampliseq/pull/786) - Creation of the summary report was failing with `--dada_ref_taxonomy silva=132`

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2 changes: 1 addition & 1 deletion modules/local/qiime2_ancom_tax.nf
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@@ -1,5 +1,5 @@
process QIIME2_ANCOM_TAX {
tag "${table.baseName} - taxonomic level: ${taxlevel}"
tag "${table.baseName}-taxonomic_level:${taxlevel}"
label 'process_medium'
label 'single_cpu'

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2 changes: 1 addition & 1 deletion modules/local/qiime2_ancombc_asv.nf
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@@ -1,5 +1,5 @@
process QIIME2_ANCOMBC_ASV {
tag "${table.baseName} ${formula}"
tag "${table.baseName}-${formula}"
label 'process_medium'
label 'single_cpu'
label 'process_long'
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2 changes: 1 addition & 1 deletion modules/local/qiime2_ancombc_tax.nf
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@@ -1,5 +1,5 @@
process QIIME2_ANCOMBC_TAX {
tag "${table.baseName} ${formula} - ${taxlevel}"
tag "${table.baseName}-${formula}-${taxlevel}"
label 'process_medium'
label 'single_cpu'

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2 changes: 1 addition & 1 deletion modules/local/qiime2_diversity_adonis.nf
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@@ -1,5 +1,5 @@
process QIIME2_DIVERSITY_ADONIS {
tag "${core.baseName} - ${formula}"
tag "${core.baseName}-${formula}"
label 'process_low'

container "qiime2/core:2023.7"
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2 changes: 1 addition & 1 deletion modules/local/qiime2_diversity_beta.nf
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@@ -1,5 +1,5 @@
process QIIME2_DIVERSITY_BETA {
tag "${core.baseName} - ${category}"
tag "${core.baseName}-${category}"
label 'process_low'

container "qiime2/core:2023.7"
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2 changes: 1 addition & 1 deletion modules/local/qiime2_seqfiltertable.nf
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@@ -1,5 +1,5 @@
process QIIME2_SEQFILTERTABLE {
tag "${repseq} filter by ${table}"
tag "${repseq}-filter-by-${table}"
label 'process_low'

container "qiime2/core:2023.7"
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