Submitting workflow OzStar supercomputer using small sized data #49
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| name: Small size tests on OzStar supercomputer | |
| run-name: Submitting workflow OzStar supercomputer using small sized data | |
| on: | |
| push: | |
| branches: | |
| - dev | |
| pull_request: | |
| release: | |
| types: [published] | |
| jobs: | |
| run-small-tests-on-ozstar: | |
| runs-on: ubuntu-latest | |
| outputs: | |
| workflow_id: ${{ steps.run.outputs.workflowId }} | |
| workspace_id: ${{ steps.run.outputs.workspaceId }} | |
| steps: | |
| - uses: seqeralabs/action-tower-launch@v2 | |
| id: run | |
| with: | |
| workspace_id: ${{ secrets.TOWER_WORKSPACE_ID }} | |
| access_token: ${{ secrets.TOWER_ACCESS_TOKEN }} | |
| compute_env: ${{ secrets.TOWER_COMPUTE_ENV }} | |
| workdir: "/fred/oz005/users/nswainst/work" | |
| run_name: "Tower_test_small_${{ github.sha }}" | |
| revision: ${{ github.sha }} | |
| profiles: test | |
| pre_run_script: | | |
| module use /apps/users/pulsar/openstack/gcc-11.3.0/modulefiles | |
| module load java/11 | |
| export PATH="$PATH:/home/nswainst" | |
| parameters: | | |
| { | |
| "upload": false | |
| } | |
| - name: Comment PR | |
| uses: thollander/actions-comment-pull-request@v2 | |
| if: github.event_name == 'pull_request' | |
| with: | |
| message: | | |
| Pipeline launched, monitor progress [here](${{ steps.run.outputs.workflowUrl }}) | |
| Details: | |
| - Workflow ID: ${{ steps.run.outputs.workflowId }} | |
| - Workspace: ${{ steps.run.outputs.WorkspaceRef }} | |
| - Workspace ID: ${{ steps.run.outputs.workspaceId }} | |
| - Workflow URL: ${{ steps.run.outputs.workflowUrl }} | |
| comment_tag: towerrun | |
| - uses: actions/upload-artifact@v3 | |
| if: success() || failure() | |
| with: | |
| name: Tower debug log file | |
| path: tower_action_*.log | |
| # get_details: | |
| # runs-on: ubuntu-latest | |
| # needs: [run-small-tests-on-ozstar] | |
| # steps: | |
| # - name: Get run details | |
| # run: | | |
| # # Install TW CLI | |
| # wget -L https://github.com/seqeralabs/tower-cli/releases/download/v0.7.3/tw-0.7.3-linux-x86_64 | |
| # sudo mv tw-* /usr/local/bin/tw | |
| # chmod +x /usr/local/bin/tw | |
| # # Use variables with ${{ needs.id.outputs.variable }} syntax | |
| # tw -o json runs view \ | |
| # -w ${{ needs.run-small-tests-on-ozstar.outputs.workspace_id }} \ | |
| # -i ${{ needs.run-small-tests-on-ozstar.outputs.workflow_id }} |