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Hakonsbm cpp11 librandom #36

Merged
merged 349 commits into from
Feb 1, 2021
Merged

Hakonsbm cpp11 librandom #36

merged 349 commits into from
Feb 1, 2021

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heplesser
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Working towards RNG bliss ...

hakonsbm and others added 30 commits October 19, 2020 12:46
@hakonsbm
Changed comparison to catch changes where number of warnings is reduced
a87571c
@jougs
Add description for SIONlib file format to backend documentation
bfc706d
@jougs
Update figure
d23ced2
@stinebuu
fix get on SynapseCollection with more than one synapse
e5dd0ce
@clinssen
refactor: separate structural plasticity from archiving node to its o…
d935458 
…wn class
@jougs @sarakonradi
Apply suggestions from code review
0e1e71f 
Co-authored-by: sarakonradi <[email protected]>
@stinebuu
Updated section on rules
50c57d8
@stinebuu
Updated the Synapse Specification section
3af70bc
@stinebuu
Added collocated synapse section
591374d
@clinssen @hakonsbm
improvements based on code review
ce9aae5 
Co-authored-by: Håkon Bakke Mørk <[email protected]>
@clinssen
rename spike_detector to spike_recorder
5f71ad6
@stinebuu
Updated Distributed parameters section
1159664
@clinssen
remove comment
9297e51
@clinssen
clean up initial value parameters
9ee3571
@clinssen
Merge remote-tracking branch 'upstream/master' into tsodyks2_first_spike
5baeb9a
@stinebuu
Updated receptor type, synapse types and inspecting/modify connections
803a425 
sections
@stinebuu
Small update to documentation
5084881
@jougs
Fix punctuation of bullet list
bcaae82
@jougs
Fix intro text for reader module
169047c
@jougs
Add SIONlib configuration instructions and fix references
e074c00
@jougs
Merge branch 'master' of github.com:nest/nest-simulator into nestio
4a4996f
@jougs
Merge branch 'master' of github.com:nest/nest-simulator into refactor…
e4fff41 
…_conngen_module
@jougs @hakonsbm
Update nestkernel/recording_backend_sionlib.h
483a1a5 
Co-authored-by: Håkon Bakke Mørk <[email protected]>
@jougs
Update conngen documentation and move to connection management guide
bdd6340
@jougs
Fix build script for libneurosim
4c249c6
@jougs
Add library search path for CSA installation
23854c3
@jougs
Fix CSA tests
368b805
@jougs
Reorder initializers to avoid warning
8ee1ba0
@jougs
Remove debug output
e87dd5e
@clinssen
Merge remote-tracking branch 'upstream/master' into tsodyks2_first_spike
f909055
jougs and others added 29 commits January 11, 2021 23:24
@jougs @stinebuu
Apply suggestions from code review
fc9c8d0 
Co-authored-by: Stine Brekke Vennemo <[email protected]>
@hakonsbm
Added Woverloaded-virtual compiler flag
8876bce
@stinebuu
Merge pull request #8 from jougs/update_connection_management_doc
17d3cdd 
Update connection management doc
@heplesser
Change Travis macOS build to MINIMAL to avoid timeouts (temporary).
64005bf
@stinebuu
Remove superfluous "the"
9855738
@heplesser
Remove dummy_param_dicts_ from ConnBuilder.
bb40aba
@stinebuu
Merge branch 'performance_issues' into fix-param-dicts
4958006
@stinebuu
Merge pull request #9 from heplesser/fix-param-dicts
575111a 
Fix param dicts
@stinebuu
Fix problems from merging.
9d88468
@stinebuu
formatting
570dd86
@stinebuu
Fixes for conngen
de2d773
@stinebuu
Fix typo
48b5f04
@jougs
Merge pull request nest#1889 from heplesser/travis-minimal-macos-build
09251aa 
Change Travis macOS build to MINIMAL to avoid timeouts (temporary).
@stinebuu
Merge remote-tracking branch 'nest-simulator/master' into update_conn…
34e0c43 
…ection_management_doc
@stinebuu
create_param_dict_ has changed name
16dc7a9
@stinebuu
Merge remote-tracking branch 'nest-simulator/master' into performance…
a9f994b 
…_issues
@jougs
Merge pull request nest#1880 from niltonlk/fix_typo_test_sp_test_mpit…
0e6cd28 
…ests_py

Fix typo in test_sp/test_mpitests.py
@hakonsbm
Merge branch 'master' into woverloaded-virtual_flag
ab3528c
@hakonsbm
Stripped down comparison to avoid expensive metadata comparisons
b704074
@stinebuu
indx -> synapse_indx to avoid confusion
aa1a8d5
@terhorstd
Update ACKNOWLEDGMENTS.md
12fff9a
@heplesser
Merge pull request nest#1894 from hakonsbm/getposition_performance
4f83877 
Improve NodeCollection iterator dereferencing performance when using composite NodeCollections with metadata
@heplesser
Merge pull request nest#1888 from hakonsbm/woverloaded-virtual_flag
ef2c0c0 
Add -Woverloaded-virtual to CI compiler flags
@hakonsbm
Merge pull request nest#1868 from stinebuu/performance_issues
f1c0bcf 
Fix performance issues for weak scale benchmarks caused by creation of DictionaryDatums
@jougs
Merge pull request nest#1834 from stinebuu/update_connection_manageme…
47b7e43 
…nt_doc

Update connection management documentation
@terhorstd
Merge pull request nest#1841 from sarakonradi/fix_issue_1650
caaf063 
Rename PyNEST microcircuit example titles
@heplesser
Merge branch 'master' into hakonsbm_cpp11-librandom
279b49c 
Conflicts:
	conngen/CMakeLists.txt
	models/erfc_neuron.h
	models/inhomogeneous_poisson_generator.h
	models/quantal_stp_connection.h
	nestkernel/CMakeLists.txt
	nestkernel/conn_builder.cpp
	nestkernel/conn_parameter.h
	nestkernel/parameter.cpp
	nestkernel/parameter.h
	pynest/nest/tests/test_all.py
@heplesser
Added mistakenly dropped file
75c93d6
@heplesser
Partial adaptation of test_connect_distributions
25d8d38
@hakonsbm hakonsbm merged commit a4c9117 into hakonsbm:feature/cpp11-librandom Feb 1, 2021
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10 participants
@heplesser @hakonsbm @jougs @stinebuu @clinssen @sarakonradi @lekshmideepu @terhorstd @sanjayankur31 @niltonlk